From 3e50d7f7bff5980754a34d803733306b2c9e5a63 Mon Sep 17 00:00:00 2001
From: Mitja Felicijan <mitja.felicijan@gmail.com>
Date: Thu, 10 Jan 2019 02:28:42 +0100
Subject: new post

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 files/dna-sequence/algorithms.tex | 53 ---------------------------------------
 1 file changed, 53 deletions(-)
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diff --git a/files/dna-sequence/algorithms.tex b/files/dna-sequence/algorithms.tex
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--- a/files/dna-sequence/algorithms.tex
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-\documentclass{article}
-\usepackage{algorithm}% http://ctan.org/pkg/algorithms
-\usepackage{algpseudocode}% http://ctan.org/pkg/algorithmicx
-\begin{document}
-
-% https://tex.stackexchange.com/questions/229355/algorithm-algorithmic-algorithmicx-algorithm2e-algpseudocode-confused
-% https://en.wikibooks.org/wiki/LaTeX/Algorithms
-
-\begin{algorithm}
-\caption{Naive  byte array to DNA encode}
-\begin{algorithmic}[1]
-\Procedure{EncodeToDNASequence}{$name$}
-   \State $fp\gets open(name)$
-   \State $en\gets null$
-   \While{$fp\not=EOF$}
-        \State $c\gets buf[0]$\Comment{Read 1 byte from buffer}
-        \State $b\gets sprintf("08b", c)$\Comment{Convert to string binary}
-        \For{\texttt{e in range[0,2,4,6]}}
-            \If {$e[0] = 48$ $1$ and $e[1] = 48$}\Comment{0x00 - A (Adenine)}
-                \State $en\gets en + `A`$
-            \EndIf
-            \If {$e[0] = 48$ $1$ and $e[1] = 49$}\Comment{0x01 - G (Guanine)}
-                \State $en\gets en + `G`$
-            \EndIf
-            \If {$e[0] = 49$ $1$ and $e[1] = 48$}\Comment{0x10 - C (Cytosine)}
-                \State $en\gets en + `C`$
-            \EndIf
-            \If {$e[0] = 49$ $1$ and $e[1] = 49$}\Comment{0x11 - T (Thymine)}
-                \State $en\gets en + `T`$
-            \EndIf
-        \EndFor
-   \EndWhile
-   \State \textbf{return} $en$\Comment{Return string DNA sequence}
-\EndProcedure
-\end{algorithmic}
-\end{algorithm}
-
-%\begin{algorithm}
-%\caption{Euclid’s algorithm}\label{euclid}
-%\begin{algorithmic}[1]
-%\Procedure{Euclid}{$a,b$}\Comment{The g.c.d. of a and b}
-%   \State $r\gets a\bmod b$
-%   \While{$r\not=0$}\Comment{We have the answer if r is 0}
-%      \State $a\gets b$
-%      \State $b\gets r$
-%      \State $r\gets a\bmod b$
-%   \EndWhile\label{euclidendwhile}
-%   \State \textbf{return} $b$\Comment{The gcd is b}
-%\EndProcedure
-%\end{algorithmic}
-%\end{algorithm}
-
-\end{document}
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