From 1100562e29f6476448b656dbddd4cf22505523f6 Mon Sep 17 00:00:00 2001
From: Mitja Felicijan <mitja.felicijan@gmail.com>
Date: Sun, 10 Mar 2024 14:59:14 +0100
Subject: Move back to JBMAFP

---
 static/assets/posts/dna-sequence/chart-speed.py | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)
 create mode 100644 static/assets/posts/dna-sequence/chart-speed.py

(limited to 'static/assets/posts/dna-sequence/chart-speed.py')

diff --git a/static/assets/posts/dna-sequence/chart-speed.py b/static/assets/posts/dna-sequence/chart-speed.py
new file mode 100644
index 0000000..c07b057
--- /dev/null
+++ b/static/assets/posts/dna-sequence/chart-speed.py
@@ -0,0 +1,23 @@
+import csv
+
+import matplotlib.pyplot as plt
+import pandas as pd
+
+# Read the data
+df = pd.read_csv("benchmarks.csv")
+
+# Settings
+plt.title("Encode to FASTA speed over time")
+plt.tight_layout(pad=2)
+fig = plt.gcf()
+fig.set_size_inches(10, 4)
+
+# Plotting
+plt.plot(df["Packages"], df["Encode to FASTA (ms)"], label = "ALB", color="black", linestyle="--")
+
+# Adding x and y axis labels
+plt.xlabel("Size of an input file", fontstyle="italic")
+plt.ylabel("Encoding time (ms)", fontstyle="italic")
+
+# Export as SVG
+plt.savefig("chart-speed.svg", format="svg")
-- 
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