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-rw-r--r--_posts/2018-01-16-using-digitalocean-spaces-object-storage-with-fuse.md260
2 files changed, 260 insertions, 25 deletions
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1---
2layout: post
3title: "Test post"
4categories:
5---
6
7## okidoki
8
9Here is my page and it's awesome.
10
11```js
12console.log('asasdasd');
13```
14
15This is all ok
16
17```ruby
18def show
19 @widget = Widget(params[:id])
20 respond_to do |format|
21 format.html # show.html.erb
22 format.json { render json: @widget }
23 end
24end
25```
diff --git a/_posts/2018-01-16-using-digitalocean-spaces-object-storage-with-fuse.md b/_posts/2018-01-16-using-digitalocean-spaces-object-storage-with-fuse.md
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1---
2layout: post
3title: "Using DigitalOcean Spaces Object Storage with FUSE"
4categories:
5---
6
7Couple of months ago [DigitalOcean](https://www.digitalocean.com) introduced new product called [Spaces](https://blog.digitalocean.com/introducing-spaces-object-storage/) which is Object Storage very similar to Amazon's S3. This really peaked my interest, because this was something I was missing and even the thought of going over the internet for such functionality was in no interest to me. Also in fashion with their previous pricing this also is very cheap and pricing page is a no-brainer compared to AWS or GCE. [Prices are clearly and precisely defined and outlined](https://www.digitalocean.com/pricing/). You must love them for that :)
8
9### Initial requirements
10
11* [Is it possible to use them as a mounted drive with FUSE?](#fuse) (tl;dr YES)
12* [Will the performance degrade over time and over different sizes of objects?](#performanse) (tl;dr NO&YES)
13* [Can storage be mounted on multiple machines at the same time and be writable?](#multiuser) (tl;dr YES)
14
15> Let me be clear. This scripts I use are made just for benchmarking and are not intended to be used in real-life situations. Besides that, I am looking into using this approaches but adding caching service in front of it and then dumping everything as an object to storage. This could potentially be some interesting post of itself. But in case you would need real-time data without eventual consistency please take this scripts as they are: not usable in such situations.
16
17## <a name="fuse"></a>Is it possible to use them as a mounted drive with FUSE?
18
19Well, actually they can be used in such manor. Because they are similar to [AWS S3](https://aws.amazon.com/s3/) many tools are available and you can find many articles and [Stackoverflow items](https://stackoverflow.com/search?q=s3+fuse).
20
21To make this work you will need DigitalOcean account. If you don't have one you will not be able to test this code. But if you have an account then you go and [create new Droplet](https://cloud.digitalocean.com/droplets/new?size=s-1vcpu-1gb&region=ams3&distro=debian&distroImage=debian-9-x64&options=private_networking,install_agent). If you click on this link you will already have preselected Debian 9 with smallest VM option.
22
23* Please be sure to add you SSH key, because we will login to this machine remotely.
24* If you change your region please remember which one you choose because we will need this information when we try to mount space to our machine.
25
26Instuctions on how to use SSH keys and how to setup them are available in article [How To Use SSH Keys with DigitalOcean Droplets](https://www.digitalocean.com/community/tutorials/how-to-use-ssh-keys-with-digitalocean-droplets).
27
28![DigitalOcean Droplets](/files/fuse-droplets.png)
29
30After we created Droplet it's time to create new Space. This is done by clicking on a button [Create](https://cloud.digitalocean.com/spaces/new) (right top corner) and selecting Spaces. Choose pronounceable ```Unique name``` because we will use it in examples below. You can either choose Private or Public, it doesn't matter in our case. And you can always change that in the future.
31
32When you have created new Space we should [generate Access key](https://cloud.digitalocean.com/settings/api/tokens). This link will guide to the page when you can generate this key. After you create new one, please save provided Key and Secret because Secret will not be shown again.
33
34![DigitalOcean Spaces](/files/fuse-spaces.png)
35
36Now that we have new Space and Access key we should SSH into our machine.
37
38```bash
39# replace IP with the ip of your newly created droplet
40ssh root@IP
41
42# this will install utilities for mounting storage objects as FUSE
43apt install s3fs
44
45# we now need to provide credentials (access key we created earlier)
46# replace KEY and SECRET with your own credentials but leave the colon between them
47# we also need to set proper permissions
48echo "KEY:SECRET" > .passwd-s3fs
49chmod 600 .passwd-s3fs
50
51# now we mount space to our machine
52# replace UNIQUE-NAME with the name you choose earlier
53# if you choose different region for your space be careful about -ourl option (ams3)
54s3fs UNIQUE-NAME /mnt/ -ourl=https://ams3.digitaloceanspaces.com -ouse_cache=/tmp
55
56# now we try to create a file
57# once you mount it may take a couple of seconds to retrieve data
58echo "Hello cruel world" > /mnt/hello.txt
59```
60
61After all this you can return to your browser and go to [DigitalOcean Spaces](https://cloud.digitalocean.com/spaces) and click on your created space. If file hello.txt is present you have successfully mounted space to your machine and wrote data to it.
62
63I choose the same region for my Droplet and my Space but you don't have to. You can have different regions. What this actually does to performance I don't know.
64
65Additional information on FUSE:
66
67* [Github project page for s3fs](https://github.com/s3fs-fuse/s3fs-fuse)
68* [FUSE - Filesystem in Userspace](https://en.wikipedia.org/wiki/Filesystem_in_Userspace)
69
70## <a name="performanse"></a>Will the performance degrade over time and over different sizes of objects?
71
72For this task I didn't want to just read and write text files or uploading images. I actually wanted to figure out if using something like SQlite is viable in this case.
73
74### Measurement experiment 1: File copy
75
76```bash
77# first we create some dummy files at different sizes
78dd if=/dev/zero of=10KB.dat bs=1024 count=10 #10KB
79dd if=/dev/zero of=100KB.dat bs=1024 count=100 #100KB
80dd if=/dev/zero of=1MB.dat bs=1024 count=1024 #1MB
81dd if=/dev/zero of=10MB.dat bs=1024 count=10240 #10MB
82
83# now we set time command to only return real
84TIMEFORMAT=%R
85
86# now lets test it
87(time cp 10KB.dat /mnt/) |& tee -a 10KB.results.txt
88
89# and now we automate
90# this will perform the same operation 100 times
91# this will output results into separated files based on objecty size
92n=0; while (( n++ < 100 )); do (time cp 10KB.dat /mnt/10KB.$n.dat) |& tee -a 10KB.results.txt; done
93n=0; while (( n++ < 100 )); do (time cp 100KB.dat /mnt/100KB.$n.dat) |& tee -a 100KB.results.txt; done
94n=0; while (( n++ < 100 )); do (time cp 1MB.dat /mnt/1MB.$n.dat) |& tee -a 1MB.results.txt; done
95n=0; while (( n++ < 100 )); do (time cp 10MB.dat /mnt/10MB.$n.dat) |& tee -a 10MB.results.txt; done
96```
97
98Files of size 100MB were not successfully transferred and ended up displaying error (cp: failed to close '/mnt/100MB.1.dat': Operation not permitted).
99
100As I suspected, object size is not really that important. Sadly I don't have the time to test performance over periods of time. But if some of you would do it please send me your data. I would be interested in seeing results.
101
102**Here are plotted results**
103
104You can download [raw result here](/files/copy-benchmarks.tsv). Measurements are in seconds.
105
106<script src="/assets/plotly-latest.min.js"></script>
107<div id="copy-benchmarks"></div>
108<script>
109(function(){
110 var request = new XMLHttpRequest();
111 request.open("GET", "/files/copy-benchmarks.tsv", true);
112 request.onload = function() {
113 if (request.status >= 200 && request.status < 400) {
114 var payload = request.responseText.trim();
115 var tsv = payload.split("\n");
116 for (var i=0; i<tsv.length; i++) { tsv[i] = tsv[i].split("\t"); }
117 var traces = [];
118 var headers = tsv[0];
119 tsv.shift();
120 Array.prototype.forEach.call(headers, function(el, idx) {
121 var x = [];
122 var y = [];
123 for (var j=0; j<tsv.length; j++) {
124 x.push(j);
125 y.push(parseFloat(tsv[j][idx].replace(",", ".")));
126 }
127 traces.push({ x: x, y: y, type: "scatter", name: el, line: { width: 1, shape: "spline" } });
128 });
129 var copy = Plotly.newPlot("copy-benchmarks", traces, { legend: {"orientation": "h"}, height: 400, margin: { l: 40, r: 0, b: 20, t: 30, pad: 0 }, yaxis: { title: "execution time in seconds", titlefont: { size: 12 } }, xaxis: { title: "fn(i)", titlefont: { size: 12 } } });
130 } else { }
131 };
132 request.onerror = function() { };
133 request.send(null);
134})();
135</script>
136
137As far as these tests show, performance is quite stable and can be predicted which is fantastic. But this is a small test and spans only over couple of hours. So you should not completely trust them.
138
139### Measurement experiment 2: SQLite performanse
140
141I was unable to use database file directly from mounted drive so this is a no-go as I suspected. So I executed code below on a local disk just to get some benchmarks. I inserted 1000 records with DROPTABLE, CREATETABLE, INSERTMANY, FETCHALL, COMMIT for 1000 times to generate statistics. As you can see performance of SQLite is quite amazing. You could then potentially just copy file to mounted drive and be done with it.
142
143```python
144import time
145import sqlite3
146import sys
147
148if len(sys.argv) < 3:
149 print("usage: python sqlite-benchmark.py DB_PATH NUM_RECORDS REPEAT")
150 exit()
151
152def data_iter(x):
153 for i in range(x):
154 yield "m" + str(i), "f" + str(i*i)
155
156header_line = "%s\t%s\t%s\t%s\t%s\n" % ("DROPTABLE", "CREATETABLE", "INSERTMANY", "FETCHALL", "COMMIT")
157with open("sqlite-benchmarks.tsv", "w") as fp:
158 fp.write(header_line)
159
160start_time = time.time()
161conn = sqlite3.connect(sys.argv[1])
162c = conn.cursor()
163end_time = time.time()
164result_time = CONNECT = end_time - start_time
165print("CONNECT: %g seconds" % (result_time))
166
167start_time = time.time()
168c.execute("PRAGMA journal_mode=WAL")
169c.execute("PRAGMA temp_store=MEMORY")
170c.execute("PRAGMA synchronous=OFF")
171result_time = PRAGMA = end_time - start_time
172print("PRAGMA: %g seconds" % (result_time))
173
174for i in range(int(sys.argv[3])):
175 print("#%i" % (i))
176
177 start_time = time.time()
178 c.execute("drop table if exists test")
179 end_time = time.time()
180 result_time = DROPTABLE = end_time - start_time
181 print("DROPTABLE: %g seconds" % (result_time))
182
183 start_time = time.time()
184 c.execute("create table if not exists test(a,b)")
185 end_time = time.time()
186 result_time = CREATETABLE = end_time - start_time
187 print("CREATETABLE: %g seconds" % (result_time))
188
189 start_time = time.time()
190 c.executemany("INSERT INTO test VALUES (?, ?)", data_iter(int(sys.argv[2])))
191 end_time = time.time()
192 result_time = INSERTMANY = end_time - start_time
193 print("INSERTMANY: %g seconds" % (result_time))
194
195 start_time = time.time()
196 c.execute("select count(*) from test")
197 res = c.fetchall()
198 end_time = time.time()
199 result_time = FETCHALL = end_time - start_time
200 print("FETCHALL: %g seconds" % (result_time))
201
202 start_time = time.time()
203 conn.commit()
204 end_time = time.time()
205 result_time = COMMIT = end_time - start_time
206 print("COMMIT: %g seconds" % (result_time))
207
208 print
209 log_line = "%f\t%f\t%f\t%f\t%f\n" % (DROPTABLE, CREATETABLE, INSERTMANY, FETCHALL, COMMIT)
210 with open("sqlite-benchmarks.tsv", "a") as fp:
211 fp.write(log_line)
212
213start_time = time.time()
214conn.close()
215end_time = time.time()
216result_time = CLOSE = end_time - start_time
217print("CLOSE: %g seconds" % (result_time))
218```
219
220You can download [raw result here](/files/sqlite-benchmarks.tsv). And again, these results are done on a local block storage and do not represent capabilities of object storage. With my current approach and state of the test code these can not be done. I would need to make Python code much more robust and check locking etc.
221
222<div id="sqlite-benchmarks"></div>
223<script>
224(function(){
225 var request = new XMLHttpRequest();
226 request.open("GET", "/files/sqlite-benchmarks.tsv", true);
227 request.onload = function() {
228 if (request.status >= 200 && request.status < 400) {
229 var payload = request.responseText.trim();
230 var tsv = payload.split("\n");
231 for (var i=0; i<tsv.length; i++) { tsv[i] = tsv[i].split("\t"); }
232 var traces = [];
233 var headers = tsv[0];
234 tsv.shift();
235 Array.prototype.forEach.call(headers, function(el, idx) {
236 var x = [];
237 var y = [];
238 for (var j=0; j<tsv.length; j++) {
239 x.push(j);
240 y.push(parseFloat(tsv[j][idx].replace(",", ".")));
241 }
242 traces.push({ x: x, y: y, type: "scatter", name: el, line: { width: 1, shape: "spline" } });
243 });
244 var sqlite = Plotly.newPlot("sqlite-benchmarks", traces, { legend: {"orientation": "h"}, height: 400, margin: { l: 50, r: 0, b: 20, t: 30, pad: 0 }, yaxis: { title: "execution time in seconds", titlefont: { size: 12 } } });
245 } else { }
246 };
247 request.onerror = function() { };
248 request.send(null);
249})();
250</script>
251
252## <a name="multiuser"></a>Can storage be mounted on multiple machines at the same time and be writable?
253
254Well, this one didn't take long to test. And the answer is **YES**. I mounted space on both machines and measured same performance on both machines. But because file is downloaded before write and then uploaded on complete there could potentially be problems is another process is trying to access the same file.
255
256## Observations and conslusion
257
258Using Spaces in this way makes it easier to access and manage files. But besides that you would need to write additional code to make this one play nice with you applications.
259
260Nevertheless, this was extremely simple to setup and use and this is just another excellent product in DigitalOcean product line. I found this exercise very valuable and am thinking about implementing some sort of mechanism for SQLite, so data can be stored on Spaces and accessed by many VM's. For a project where data doesn't need to be accessible in real-time and can have couple of minutes old data this would be very interesting. If any of you find this proposal interesting please write in a comment box below or shoot me an email and I will keep you posted.