Move back to JBMAFP

1 files changed, 28 insertions, 0 deletions

diff --git a/static/assets/posts/dna-sequence/chart-size.py b/static/assets/posts/dna-sequence/chart-size.py
new file mode 100644
index 0000000..4fc408d
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+++ b/static/assets/posts/dna-sequence/chart-size.py
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+import csv
+
+import matplotlib.pyplot as plt
+import pandas as pd
+
+# Read the data
+df = pd.read_csv("benchmarks.csv")
+
+# Settings
+plt.title("Encode to FASTA out filesize")
+plt.tight_layout(pad=2)
+fig = plt.gcf()
+fig.set_size_inches(10, 4)
+
+# Plotting
+plt.plot(df["Packages"], df["FASTA file size (KB)"], label = "Raw", color="black", linestyle="-")
+plt.plot(df["Packages"], df["FASTA gzipped (KB)"], label = "Gzipped", color="black", linestyle="--")
+
+# Adding x and y axis labels
+plt.xlabel("Size of an input file", fontstyle="italic")
+plt.ylabel("File size (KB)", fontstyle="italic")
+
+# Legend
+legend = plt.legend()
+legend.get_frame().set_linewidth(0)
+
+# Export as SVG
+plt.savefig("chart-size.svg", format="svg")